Development of a Molecular Properties Database for Enhanced Chemical Ionization Mass Spectrometry in Trace Gas Analysis

These computed molecular parameters, including dipole moment, polarizability, proton affinity, and ionization energy of volatile organic compounds (VOCs), are crucial for the identification and quantification of VOCs in chemical ionization mass spectrometry. These parameters are determined using Density Functional Theory (DFT) methods implemented in software such as Gaussian and Quantum ESPRESSO. The electric dipole moment and polarizability of neutral molecules are fundamental in calculating the rate coefficients of ion-molecule reactions through collision-based models. Similarly, proton affinity is key to assessing the feasibility of proton transfer from a reagent ion to the neutral molecule in potential proton transfer reactions, typically involving H3O+ or NH4+ ions in mass spectrometry. Ionization energy, on the other hand, determines the likelihood of charge transfer from NO+ or O2+ ions to a neutral molecule.

This image has an empty alt attribute; its file name is pexels-photo-1148820.webp

Image credit: pexels.com

The table below shows DFT computed values of molecular properties of VOCs related to food and beverages.

Sr. noCAS no.Molecule NameMass
(a u)
Dipole Moment
(Debye)
Polarizability
(ų)
Proton Affinity
(Kcal/mol)
Ionization Energy
(eV)
187-40-12,4,6-trichloroanisole211.471.571318.3618183.518.87
2607-99-82,4,6-tribromoanisole344.831.541122.1138186.178.67
387-86-5Pentachlorophenol266.341.784620.3273167.158.76
4608-71-9Pentabromophenol488.591.54526.1441174.178.75
588-06-22,4,6-trichlorophenol197.451.466416.5319174.359.03
6118-79-62,4,6-tribromophenol330.81.402720.2875178.568.81
754135-80-72,3,4-trichloroanisole211.474.421118.384181.328.36
850375-10-52,3,6-trichloroanisole211.471.905818.2082183.878.83
9938-86-32,3,4,5-tetrachloroanisole245.913.754220.4157178.48.44
10938-22-72,3,4,6-tetrachloroanisole245.912.00420.2719181.968.85
116936-40-92,3,5,6-tetrachloroanisole245.911.609520.279181.498.85
12553-82-22,4-dichloroanisole177.033.395916.5512182.778.26
131984-65-22,6-dichloroanisole177.032.044516.2137186.698.96
1465767-22-8Cis-1,5-octadien-3-one124.183.016115.2005211.138.7
1550306-18-8Cis-1,5-octadien-3-ol126.21.995215.6403200.878.72
163391-86-41-octene-3-ol128.221.436315.3933197.689.37
174312-99-61-octene-3-one126.23.157614.6985203.949.23
18124-13-0Octanal128.213.332914.845192.829.38
1924168-70-52-sec-butyl-3-methoxypyrazine166.221.329718.4263215.848.53
2024683-00-93-isobutyl-2-methoxypyrazine166.221.413718.3829215.778.51
2125773-40-42-isopropyl-3-methoxypyrazine152.191.378316.7422215.398.56
2292508-08-22-methoxy-3,5-dimethylpyrazine138.171.125415.103217.168.32
232371-42-82-methylisoborneol168.281.529818.7068217.799.21
2419700-21-1Geosmin182.311.427420.2848205.058.86
2590-05-1Guaiacol124.142.871113.2576191.57.91
262785-89-94-ethylguaiacol152.191.189817.1949198.287.55
270123-07-094-ethylphenol122.161.449414.4601182.328.07
28470-82-6Eucalyptol (1,8-cineole)154.251.550717.014213.248.46
291124-39-64-ethylcatechol138.172.375215.1428198.287.85
3093-51-64-methylguaiacol138.171.206415.3233195.187.58
3118374-76-0Rotundone218.343.968226.1015219.78.36
32106-24-1Geraniol154.252.448219.4274212.378.1
3353834-70-1Hotrienol152.241.738719.8334208.057.99
3478-70-6Linalool154.251.930218.932214.278.38
35106-25-2Nerol154.252.639718.6116209.878.37
3698-55-5α-terpineol154.251.664817.9833200.568.23
37120-72-9Indole117.152.159914.7231199.497.66
38603-76-91-methylindole131.182.484916.7336203.647.44
39551-93-92-aminoacetophenone135.161.961916.0802214.577.74
4087-64-92-chloro-6-methylphenol142.580.878514.367177.478.41
41106-68-33-octanone128.212.742714.5962203.379.12
421195-79-5Fenchone152.233.09716.6014207.118.55
431632-73-1Fenchol154.251.462217.0469198.489.15
4418409-17-1Trans-2-octen-1-ol128.211.73715.5912203.088.94
451825-21-4Pentachloroanisole280.352.119222.2201180.358.95
467783-06-04Hydrogen Sulfide34.080.993.71169.110.4
4774-93-1Methanethiol48.111.565.55186.19.4
481975-08-01Ethanethiol62.141.687.43190.69.2
4975-18-3Dimethyl Sulfide62.141.67.46199.38.6
50352-93-2Diethyl Sulfide90.191.6411.34206.38.3
51624-92-0Dimethyl Disulfide94.22.0310.79193.78.1
52110-81-6Diethyl Disulfide122.32.1514.67197.87.9
531534-08-03Methyl thioacetate90.151.369.64198.59.1
5451755-83-03-Mercaptohexan-1-ol134.241.6815.43196.68.6
5519872-52-74-Mercapto-4-methylpentan-2-one132.232.2714.86198.28.5
56255391-65-24-Mercapto-4-methylpentan-2-ol134.242.5315.34204.78.5
5795-16-9Benzothiazole135.191.3415.91220.78.6
581998-02-022-Furanmethanethiol114.171.9412.81199.18.1
5960-24-22-mercaptoethanol78.142.58.14193.49
60100-53-8Benzenemethanethiol124.211.4815.74195.38.3
615862-40-82-mercaptoethyl-acetate120.171.8311.91199.29.1
6226473-61-03-mercaptopropyl-acetate134.21.6113.97199.69
6375100-46-8cis-3,6-dimethyl-1,2,4,5-tetrathiane184.4019.83196.18
645287-45-6prenyl-mercaptan102.21.7813.35198.28.1
6575100-47-9trans-3,6-dimethyl1,2,4,5-tetrathiane184.4019.11195.38.3
6628588-74-12-Methyl-3-furanthiol114.170.912.47190.37.7
67149834-43-52-methylthiolane-3-ol118.22.1212.71207.58.2
6834300-94-23-Mercapto-3-methylbutan-1-ol120.221.8413.52197.78.6
695466-06-08ethyl-3-mercaptopropionate134.22.7613.91196.78.9
70137-00-85-2-hydroxyethyl-4-methylthiazole143.212.7915.29229.78.1
7113679-85-12-Methyltetrahydrothiophen-3-one116.181.7212.14196.18.6
720505-10-023-Methylsulfanylpropan-1-ol106.193.0612.03203.18.4
73136954-20-63-Mercaptohexylacatate176.281.4719.32194.98.8
74625-60-5ethylthioacetate104.171.4111.57201.29
75109-08-02-methylpyrazine94.110.6510.32216.529.25
7613925-00-32-ethylpyrazine108.140.7212.15217.649.17
7713925-07-02-ethyl-3,5-dimethylpyrazine136.190.5716.07225.658.74
78108-50-92,6-dimethylpyrazine108.140.7212.24221.099.26
79123-32-02,5-dimethylpyrazine108.14012.34220.389.21
8014667-55-12,3,5-trimethylpyrazine122.170.6514.23224.768.88
811124-11-092,3,5,6-tetramethylpyrazine136.19016.18228.098.53
82106-98-91-butene56.110.357.52
8378-79-5isoprene68.120.2510.22
84108-88-3toluene92.140.3412.9
8575-07-0acetaldehyde44.052.654.3
8664-17-5ethanol46.071.534.53
8767-64-1acetone58.082.296.09
88123-38-6propanal58.082.756.13
89108-95-2phenol94.111.3411.73
902043-61-0cyclohexanal112.171.5111.32
91100-52-7Benzaldehyde106.123.2810.06
92106-36-5propyl propanoate116.161.7914.2
93105-54-4ethylbutanoate116.161.7414.2
94109-21-7butyl butanoate144.212.1217.2
95107-92-6N-butyric acid88.111.810
96513-86-03-hydroxybutanone88.112.68.8
97557-31-3allyl ethyl ether86.131.210.7
98127-17-3pyruvic acid88.062.36.6
9997-53-0eugenol164.22.519.3
100103-26-4methyl cinnamate162.181.919.2
101119-61-9Benzophenone182.223.2322.75216.258.68
10222583-75-1Benzophenone-d10192.283.2322.75216.388.68
1031137-42-44-hydroxybenzophenone198.222.4823.95219.528.37
10425913-05-74-fluoro-4hydroxybenzophenone216.213.9523.97218.418.58
105131-58-82-methylbenzophenone196.243.3724.27216.948.56
106117-99-72-hydroxybenzophenone198.224.2623.39218.578.39
107643-65-23-methylbenzophenone196.243.6224.73217.958.51
108134-84-94-methylbenzophenone196.243.5325.08219.678.49
1092128-93-04-phenylbenzophenone258.33.3233.22225.528.55
110131-57-72-hydroxy-4-methoxybenzophenone228.244.2926.74191.458.05
111606-28-0methyl-2-benzoylbenzoate240.254.4627.04216.818.63
1121143-72-22,3,4-trihydroxybenzophenone230.224.4925.13186.248.13
113131-53-32,2-dihydroxy-4-methoxybenzophenone244.245.5927.35217.367.88
11485-19-85-chloro-2-hydroxybenzophenone232.662.4125.91211.888.33
11584-66-2diethyl phthalate222.243.6723.16202.569.05
116120-51-4benzyl benzoate212.242.3425.05205.948.87
11784-69-5disobutyl phthalate278.343.8230.49204.788.99
11884-74-2dibutyl phthalate278.343.9630.17204.619.03
119117-82-8bis (2-methoxyethyl) phthalate282.294.928.19220.658.68
120605-54-9bis (2-ethoxyethyl) phthalate310.343.8531.98209.448.56
121131-11-3dimethyl phthalate194.183.3819.42199.159.16
122947-19-31-Hydroxycyclohexyl Phenyl Ketone204.261.422.88208.538.65
123525-82-6Flavone222.244.4928.11226.918.28
124131-18-0dipentyl phthalate306.43.7933.74204.599.01
12585-68-7benzyl butyl phthalate312.43.8735.31205.198.6
12684-63-9Bis (4-methyl-2-pentyl) phthalate334.40.8437.36213.978.9
12784-75-3Di-n-hexyl phthalate334.43.9237.61217.239.11
128117-83-9Bis (2-n-butoxyethyl) phthalate366.43.2439.74224.778.58
12984-61-7dicyclohexyl phthalate330.43.6635.99213.138.85
130117-81-7di(2-ethylhexyl) phthalate390.64.9144.47217.948.88

DFT computed molecular parameters

DFT computed molecular parameters

The values computed using Density Functional Theory (DFT) methods provided herein serve as valuable references, particularly in situations where experimental values are unavailable. For the most comprehensive list of molecules and the most current updates on these parameters, please refer to our continuously updated repository. When incorporating this work into your research or publications, please ensure proper citation as per the references provided below.

References

  • Manjeet Bhatia, Franco Biasioli, Luca Cappellin, Paolo Piseri, Nicola Manini, Abinitio calculation of the proton transfer reaction rate coefficients to volatile organic compounds related to cork-taint in wine, Journal of Mass Spectrometry, 55(11), e4592, 2020.
  • Manjeet Bhatia, Nicola Manini, Franco Biasioli, Luca Cappellin, Calculated Rate Coefficients Between CI-MS Reagent Ions and Organosulfur Compounds Causing Food Taints and Off-flavours, International Journal of Mass Spectrometry, 478, 116860 2022.
  • Manjeet Bhatia, Integrating DFT and CI-MS Techniques to Assess Benzophenone Derivatives in Food Packaging: Implications for Enhancing Food Quality and Safety, 2024., Journal of mass spectrometry , 06 March 2024.
  • Manjeet Bhatia, Computational Insights into Phthalate Ester-Linked VOCs: A DFT-Based Approach for CI-MS Analysis, Rapid Communications in Mass Spectrometry , 2024.
Categories: , , , , ,

Leave a Reply

Your email address will not be published. Required fields are marked *